StartupsEventsJobsNewsTV
dutchstartup.ai
EventsJobsNewsTV

Job opening

(Associate) Scientist Protein Engineering and Molecular Modeling

Delft · Full-time · Posted 14 Jun 2026

Apply now
The roleLocationMore jobsSimilar
01

What you will do

About this role

# (Associate) Scientist Protein Engineering and Molecular Modeling

We are seeking a skilled researcher specializing in protein engineering and molecular modeling to join dsm-firmenich's Computational Biotechnology team. In this role, you will model and optimize enzymes to support the development of innovative, sustainable bioproduction processes and specialty enzymes. You will translate structure-function insights into practical protein engineering strategies, from biodiversity exploration to library design. Working in multidisciplinary teams, you will collaborate closely with experts to scale molecular insights into real-world applications.

## Key Responsibilities

  • Shape projects in collaboration with business partners, translating objectives into clear and actionable experimental plans
  • Model protein structures to uncover structure-function relationships and design targeted mutant or diversity libraries
  • Analyze, interpret, and communicate results effectively to stakeholders through reports and presentations
  • Develop and apply machine learning and protein AI models to predict and improve structure-function outcomes
  • Contribute to best practices and shared computational tools within the global data science and life sciences community
  • Collaborate with cross-functional teams globally while applying modern software and ML practices, including Python and coding tools, to drive project success

## Required Qualifications

  • PhD (or equivalent) in Biochemistry, Biophysical Chemistry, Bioinformatics, or Computer Science, with a focus on protein engineering and in silico design
  • 2-4 years of experience in protein engineering and molecular modeling, applying modern data-driven approaches in areas such as metabolic engineering, enzymes, or biocatalysis
  • Strong ability to quickly understand diverse proteins and enzymes, leveraging literature and data sources to assess scientific and business relevance
  • Proven experience with bioinformatics and protein modeling tools (e.g., Rosetta, Schrödinger, Yasara) and databases such as UniProt, PDB, KEGG, or BRENDA
  • Proficiency in Python and modern computational practices, with experience in ML tools, code management, and working in Unix/Linux environments; exposure to advanced simulations or protein AI tools is a plus
  • Excellent problem-solving, collaboration, and communication skills, with a demonstrated track record of innovation and impact

Skills & experience

MediorPythonMachine LearningProtein EngineeringMolecular ModelingRosettaSchrödingerYasaraUniProtPDBKEGGBRENDABioinformaticsUnix/LinuxProtein AIMolecular Dynamics Simulations
02

Where you will work

Location

Nearby

Loading nearby…

Address
Delft · Zuid-Holland2613 AXNo exact address
03

More at this company

More jobs

(Senior) Scientist AI/ML for Protein and Metabolic EngineeringDelft · Full-timeView →(Senior) Scientist AI/ML for Protein and Metabolic EngineeringDelftView →(Senior) Scientist AI/ML for Protein and Metabolic EngineeringDelft · Full-timeView →
04

Keep exploring

Similar jobs

Software Engineer, Data Infrastructure & AcquisitionVeldhoven · Full-timeView →AI Business AnalystVeldhoven · Full-timeView →Lead Data EngineerFull-timeView →AI Solutions EngineerNijmegen · Full-timeView →Senior Data Engineer PricingFull-timeView →Staff Officer (Data Scientist) - NATO 2030Full-timeView →
dutchstartup.ai

The platform for the Dutch AI scene.

About·Contact·Privacy·Terms